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biostack Weekly | 2015-07-19 (第八期)

13’th July, 2015 23:26 RT @DrJCThrash Automated and accurate estimation of gene family abundance from shotgun metagenomes w/ @phylogenomics @tjsharpton http://t.co/5djMe0WTpA

14’th July, 2015 18:14 RIG: Recalibration and Interrelation of Genomic Sequence Data with the GATK http://t.co/25OPkzHBrX 19:30 Bandage: interactive visualization of de novo genome assemblies http://t.co/86o6LbONwp 19:35 Good laboratory practice for clinical next-generation sequencing […]

biostack Weekly | 2015-07-12 (第七期)

6’th July, 2015 22:39 RT @moorejh Don’t Get Your Kids’ Genes Sequenced Just To Keep Up http://t.co/7LFqd9bswn #DNA #genomics #ethics http://t.co/q4q1I1bUAr 23:00 RT @Strep_papers WGS accurately predicts antimicrobial resistance in Escherichia coli. http://t.co/utOCog1bDZ http://t.co/14ByUH4Isp 23:12 RT @biorxivpreprint SPARTA: Simple Program for Automated reference-based bacterial RNA-seq Transcriptome Analysis http://t.co/NvjeFjbplO

7’th July, 2015 23:40 RT @kbradnam Still […]

biostack Weekly | 2015-07-05 (第六期)

29’th June, 2015 13:19 RT @lexnederbragt Getting the most out of RNA-seq data analysis #peerJPreprint https://t.co/LpfIvUkg56 14:57 CanvasXpress is a standalone HTML5 graphing library written in Javascript to explore complex data sets. http://t.co/pHZREpUGRP 16:57 RT @BI0graphika #Antibiotic Resistance explorer, a reactive #datavis built with #dcjs + #crossfilter http://t.co/4M3c0jFmwP #d3js #bootstrap #bio4j 22:23 Prioritizing risks of […]

biostack Weekly | 2015-06-28 (第五期)

不敢偷懒,还是把这周Twitter的收藏列表贡献出来;

21’st June, 2015

15:23 RT @MicrobiomDigest Biodiversity and distribution of polar freshwater DNA viruses – Daniel Aguirre de Cárcer @ScienceAdvances #virome http://t.co/mZ27PhyB45 15:24 RT @MicrobiomDigest Metagenomic analysis of #microbiome in colon tissue from subjects with #IBD reveals interplay of viruses and bacteria http://t.co/VcTdcttjK3 15:31 RT @DataScienceCtrl Data Science Wars: R versus Python http://t.co/abLJo6fKtt http://t.co/dAg522ZZDj […]

biostack Weekly | 2015-06-21 (第四期)

Twitter list

14’th June, 2015 08:56 RT @sjackman Various programs used for the assembly of @PacBio data. Anyone have corrections or additions for me? @infoecho http://t.co/bZGxUbw5mX 09:12 RT @pathogenomenick Frequency-based haplotype reconstruction from deep sequencing data of bacterial populations http://t.co/NXX3eYIrBh 12:40 RT @sjackman UniqTag: My paper for assigning k-mer IDs to genes using a minimizer […]

biostack Weekly | 2015-06-14 (第三期)

Twitter list

7’th June, 2015

09:38 RT @genetics_blog Finally, labeled multi-panel ggplot2 figures made easy http://t.co/vl1W1IsbG7 thanks @ClausWilke http://t.co/K62PTnZsrG 09:38 RT @genetics_blog ACE: Accurate Correction of Errors using K-mer tries http://t.co/DeMbJYbbcP 09:39 RT @genetics_blog oswitch. okay this is awesome. https://t.co/QsfYZriiNn h/t @pathogenomenick http://t.co/5zLeWtlgUX 09:40 RT @genetics_blog sRNAtoolbox: an integrated collection of small RNA research tools […]

biostack Weekly | 2015-06-07 (第二期)

Twitter list

31’st May, 2015

11:48 RT @takipid New post: The Ultimate JSON Library Benchmark: JSON.simple vs GSON vs Jackson vs JSON http://t.co/AEpoycQ5M9 http://t.co/2h0vBcSuiL

1’st June, 2015

10:21 Goodbye CEGMA, hello BUSCO! http://t.co/cOFIqRKPt8 a19:27 Python, Ruby, and Golang: A Command-Line Application Comparison http://t.co/pVgjTTum0R 19:35 The Architecture of Open Source Applications http://t.co/noKFkNxWt2

2’nd June, 2015

07:13 […]

biostack Weekly | 2015-05-30

开始尝试做一个biostack周报东西,分享每周关注的生物信息相关进展,包括Twitter和微博两部分内容; 这次做Twitter列表, 附送Twitter列表的 PDF 版本, 网盘地址:http://pan.baidu.com/s/1hqkv7Nm

Twitter list

26’th May, 2015

19:53 MSPKmerCounter: A Fast and Memory Efficient Approach for K-mer Counting http://t.co/yH2oTD5tq9 22:11 SFA-SPA: a suffix array based short peptide assembler for metagenomic data http://t.co/gGu78OGG8L 22:12 CNOGpro: detection and quantification of CNVs in prokaryotic whole-genome sequencing data http://t.co/H2M47qLO9X 22:13 MetAmp: combining amplicon data from […]