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NGS数据分析中的质量控制工具

NGS数据分析中的质量控制工具,老规矩,先占坑!

基本介绍 NGS QC-Chain (Zhou et al. 2013)1 http://www.computationalbioenergy.org/qc-chain.html RNA-SeQC (DeLuca et al. 2012)2 https://confluence.broadinstitute.org/display/CGATools/RNA-SeQC HTQC (Yang et al. 2013)3 http://sourceforge.net/projects/htqc/ Trimmomatic (Lohse et al. 2012)4 http://www.usadellab.org/cms/?page=trimmomatic NGS QC Toolkit (Patel and Jain 2012)5 http://www.nipgr.res.in/ngsqctoolkit.html FastUniq (Xu et al. 2012)6 http://sourceforge.net/projects/fastuniq/ RseQC (Wang et al. 2012)7 http://code.google.com/p/rseqc/ CHANCE (Diaz et al. 2012)8 https://github.com/songlab/chance htSeqTools (Planet […]